Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.33□□□□□ -0.44
Col10a1Q05306 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Col10a1Q05306 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col10a1Q05306 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.33□□□□□ -0.44
Col10a1Q05306 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.33□□□□□ -0.44
Col10a1Q05306 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.33□□□□□ -0.44
Col10a1Q05306 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.33□□□□□ -0.44
Col10a1Q05306 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col10a1Q05306 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.32□□□□□ -0.44
Col10a1Q05306 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col10a1Q05306 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Col10a1Q05306 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col10a1Q05306 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.32□□□□□ -0.44
Col10a1Q05306 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.32□□□□□ -0.44
Col10a1Q05306 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col10a1Q05306 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.32□□□□□ -0.44
Col10a1Q05306 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.32□□□□□ -0.44
Col10a1Q05306 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col10a1Q05306 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col10a1Q05306 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.31□□□□□ -0.44
Col10a1Q05306 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.31□□□□□ -0.44
Col10a1Q05306 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.31□□□□□ -0.44
Col10a1Q05306 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.31□□□□□ -0.44
Col10a1Q05306 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.31□□□□□ -0.44
Col10a1Q05306 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.31□□□□□ -0.44
Col10a1Q05306 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.31□□□□□ -0.44
Col10a1Q05306 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.31□□□□□ -0.44
Col10a1Q05306 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.31□□□□□ -0.44
Col10a1Q05306 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col10a1Q05306 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col10a1Q05306 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col10a1Q05306 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms