Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.65■□□□□ 0.26
Smarcc1P97496 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcc1P97496 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc1P97496 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Smarcc1P97496 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.64■□□□□ 0.26
Smarcc1P97496 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Smarcc1P97496 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarcc1P97496 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Smarcc1P97496 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.64■□□□□ 0.25
Smarcc1P97496 Gm12502-201ENSMUST00000120197 444 ntBASIC16.64■□□□□ 0.25
Smarcc1P97496 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 B9d1os-201ENSMUST00000137010 674 ntBASIC16.64■□□□□ 0.25
Smarcc1P97496 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smarcc1P97496 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.64■□□□□ 0.25
Smarcc1P97496 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.64■□□□□ 0.25
Smarcc1P97496 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarcc1P97496 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.64■□□□□ 0.25
Smarcc1P97496 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.64■□□□□ 0.25
Smarcc1P97496 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc1P97496 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarcc1P97496 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Smarcc1P97496 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.63■□□□□ 0.25
Smarcc1P97496 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.63■□□□□ 0.25
Smarcc1P97496 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smarcc1P97496 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.63■□□□□ 0.25
Smarcc1P97496 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Gm6458-201ENSMUST00000211573 635 ntBASIC16.63■□□□□ 0.25
Smarcc1P97496 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.63■□□□□ 0.25
Smarcc1P97496 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smarcc1P97496 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smarcc1P97496 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.63■□□□□ 0.25
Smarcc1P97496 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smarcc1P97496 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Smarcc1P97496 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms