Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CiitaP79621 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Gm10146-201ENSMUST00000072739 309 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.44□□□□□ -0.1
CiitaP79621 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CiitaP79621 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.43□□□□□ -0.1
CiitaP79621 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.43□□□□□ -0.1
CiitaP79621 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.43□□□□□ -0.1
CiitaP79621 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.43□□□□□ -0.1
CiitaP79621 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.43□□□□□ -0.1
CiitaP79621 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.43□□□□□ -0.1
CiitaP79621 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.43□□□□□ -0.1
CiitaP79621 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.43□□□□□ -0.1
CiitaP79621 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.43□□□□□ -0.1
CiitaP79621 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CiitaP79621 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.42□□□□□ -0.1
CiitaP79621 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.42□□□□□ -0.1
CiitaP79621 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.42□□□□□ -0.1
CiitaP79621 Gm5187-201ENSMUST00000117317 991 ntBASIC14.42□□□□□ -0.1
CiitaP79621 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.42□□□□□ -0.1
CiitaP79621 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CiitaP79621 Gm8062-201ENSMUST00000139696 444 ntBASIC14.42□□□□□ -0.1
CiitaP79621 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.42□□□□□ -0.1
CiitaP79621 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CiitaP79621 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Snora73a-201ENSMUST00000082453 205 ntBASIC14.42□□□□□ -0.1
CiitaP79621 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CiitaP79621 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CiitaP79621 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms