Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Lsm6P62313 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm6P62313 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Lsm6P62313 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.73□□□□□ -0.53
Lsm6P62313 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.73□□□□□ -0.53
Lsm6P62313 Gm42550-201ENSMUST00000201553 960 ntBASIC11.73□□□□□ -0.53
Lsm6P62313 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lsm6P62313 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lsm6P62313 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lsm6P62313 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm6P62313 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Grk6-205ENSMUST00000224653 2976 ntBASIC11.73□□□□□ -0.53
Lsm6P62313 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Lsm6P62313 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.72□□□□□ -0.53
Lsm6P62313 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Lsm6P62313 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Lsm6P62313 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.72□□□□□ -0.53
Lsm6P62313 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.72□□□□□ -0.53
Lsm6P62313 Gm28631-201ENSMUST00000190740 334 ntBASIC11.72□□□□□ -0.53
Lsm6P62313 Gm38223-201ENSMUST00000194484 695 ntBASIC11.72□□□□□ -0.53
Lsm6P62313 Gm6218-201ENSMUST00000219812 628 ntBASIC11.72□□□□□ -0.53
Lsm6P62313 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.72□□□□□ -0.53
Lsm6P62313 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm6P62313 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm6P62313 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm6P62313 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm6P62313 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm6P62313 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm6P62313 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Lsm6P62313 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.71□□□□□ -0.53
Lsm6P62313 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm6P62313 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm6P62313 Gm15371-201ENSMUST00000117057 784 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms