Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Mmp20P57748 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Mmp20P57748 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Mmp20P57748 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Mmp20P57748 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.19■□□□□ 0.02
Mmp20P57748 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Mmp20P57748 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.19■□□□□ 0.02
Mmp20P57748 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Gm26956-201ENSMUST00000182176 986 ntBASIC15.19■□□□□ 0.02
Mmp20P57748 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Mmp20P57748 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.19■□□□□ 0.02
Mmp20P57748 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Mmp20P57748 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.19■□□□□ 0.02
Mmp20P57748 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Mmp20P57748 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.19■□□□□ 0.02
Mmp20P57748 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp20P57748 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.19■□□□□ 0.02
Mmp20P57748 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.18■□□□□ 0.02
Mmp20P57748 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.18■□□□□ 0.02
Mmp20P57748 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.18■□□□□ 0.02
Mmp20P57748 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Mmp20P57748 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.18■□□□□ 0.02
Mmp20P57748 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.18■□□□□ 0.02
Mmp20P57748 Gm31256-201ENSMUST00000194705 506 ntBASIC15.18■□□□□ 0.02
Mmp20P57748 Rps4l-202ENSMUST00000204242 789 ntBASIC15.18■□□□□ 0.02
Mmp20P57748 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.18■□□□□ 0.02
Mmp20P57748 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.18■□□□□ 0.02
Mmp20P57748 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp20P57748 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Mmp20P57748 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
Mmp20P57748 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp20P57748 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.17■□□□□ 0.02
Mmp20P57748 Snord83b-201ENSMUST00000104546 94 ntBASIC15.17■□□□□ 0.02
Mmp20P57748 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Mmp20P57748 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.17■□□□□ 0.02
Mmp20P57748 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.17■□□□□ 0.02
Mmp20P57748 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Mmp20P57748 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.17■□□□□ 0.02
Mmp20P57748 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.17■□□□□ 0.02
Mmp20P57748 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Mmp20P57748 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.17■□□□□ 0.02
Mmp20P57748 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.17■□□□□ 0.02
Mmp20P57748 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.17■□□□□ 0.02
Mmp20P57748 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Mmp20P57748 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Mmp20P57748 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Mmp20P57748 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.17■□□□□ 0.02
Mmp20P57748 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Mmp20P57748 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.16■□□□□ 0.02
Mmp20P57748 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp20P57748 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp20P57748 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp20P57748 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Mmp20P57748 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.16■□□□□ 0.02
Mmp20P57748 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms