Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.8□□□□□ -0.36
Cdkn2bP55271 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.79□□□□□ -0.36
Cdkn2bP55271 Gm2756-201ENSMUST00000195851 400 ntBASIC12.79□□□□□ -0.36
Cdkn2bP55271 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Gm6888-201ENSMUST00000221983 706 ntBASIC12.79□□□□□ -0.36
Cdkn2bP55271 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.79□□□□□ -0.36
Cdkn2bP55271 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdkn2bP55271 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.78□□□□□ -0.36
Cdkn2bP55271 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.78□□□□□ -0.36
Cdkn2bP55271 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm24447-201ENSMUST00000083977 338 ntBASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.78□□□□□ -0.36
Cdkn2bP55271 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdkn2bP55271 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.78□□□□□ -0.36
Cdkn2bP55271 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms