Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Gm15370-201ENSMUST00000117158 253 ntBASIC13.26□□□□□ -0.29
Atxn1P54254 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Atxn1P54254 Gm13786-201ENSMUST00000122371 333 ntBASIC13.26□□□□□ -0.29
Atxn1P54254 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.26□□□□□ -0.29
Atxn1P54254 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.26□□□□□ -0.29
Atxn1P54254 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Gm42550-201ENSMUST00000201553 960 ntBASIC13.26□□□□□ -0.29
Atxn1P54254 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.26□□□□□ -0.29
Atxn1P54254 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.26□□□□□ -0.29
Atxn1P54254 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.26□□□□□ -0.29
Atxn1P54254 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Gm8227-201ENSMUST00000223306 571 ntBASIC13.26□□□□□ -0.29
Atxn1P54254 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.26□□□□□ -0.29
Atxn1P54254 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Atxn1P54254 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atxn1P54254 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.25□□□□□ -0.29
Atxn1P54254 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Atxn1P54254 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.25□□□□□ -0.29
Atxn1P54254 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.25□□□□□ -0.29
Atxn1P54254 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.25□□□□□ -0.29
Atxn1P54254 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Atxn1P54254 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.25□□□□□ -0.29
Atxn1P54254 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Atxn1P54254 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Atxn1P54254 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 B9d1os-201ENSMUST00000137010 674 ntBASIC13.25□□□□□ -0.29
Atxn1P54254 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Atxn1P54254 Gm25927-201ENSMUST00000175058 117 ntBASIC13.25□□□□□ -0.29
Atxn1P54254 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Gm29787-201ENSMUST00000222129 849 ntBASIC13.25□□□□□ -0.29
Atxn1P54254 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.25□□□□□ -0.29
Atxn1P54254 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.25□□□□□ -0.29
Atxn1P54254 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Atxn1P54254 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Atxn1P54254 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atxn1P54254 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Atxn1P54254 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Atxn1P54254 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Atxn1P54254 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Atxn1P54254 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.24□□□□□ -0.29
Atxn1P54254 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Gm25261-201ENSMUST00000157416 134 ntBASIC13.24□□□□□ -0.29
Atxn1P54254 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.24□□□□□ -0.29
Atxn1P54254 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.24□□□□□ -0.29
Atxn1P54254 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.24□□□□□ -0.29
Atxn1P54254 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.24□□□□□ -0.29
Atxn1P54254 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atxn1P54254 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms