Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Mir7221-201ENSMUST00000184009 72 ntBASIC12.81□□□□□ -0.36
Ube2e3P52483 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.81□□□□□ -0.36
Ube2e3P52483 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.81□□□□□ -0.36
Ube2e3P52483 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Ube2e3P52483 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.81□□□□□ -0.36
Ube2e3P52483 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ube2e3P52483 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.81□□□□□ -0.36
Ube2e3P52483 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.81□□□□□ -0.36
Ube2e3P52483 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ube2e3P52483 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ube2e3P52483 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.8□□□□□ -0.36
Ube2e3P52483 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.8□□□□□ -0.36
Ube2e3P52483 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Gm12859-201ENSMUST00000117834 427 ntBASIC12.8□□□□□ -0.36
Ube2e3P52483 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.8□□□□□ -0.36
Ube2e3P52483 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.8□□□□□ -0.36
Ube2e3P52483 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.8□□□□□ -0.36
Ube2e3P52483 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.8□□□□□ -0.36
Ube2e3P52483 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Ube2e3P52483 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ube2e3P52483 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ube2e3P52483 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.79□□□□□ -0.36
Ube2e3P52483 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.79□□□□□ -0.36
Ube2e3P52483 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.79□□□□□ -0.36
Ube2e3P52483 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.79□□□□□ -0.36
Ube2e3P52483 Mir6392-201ENSMUST00000184924 108 ntBASIC12.79□□□□□ -0.36
Ube2e3P52483 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.79□□□□□ -0.36
Ube2e3P52483 Gm18624-201ENSMUST00000220966 658 ntBASIC12.79□□□□□ -0.36
Ube2e3P52483 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.79□□□□□ -0.36
Ube2e3P52483 Gm15823-201ENSMUST00000064305 670 ntBASIC12.79□□□□□ -0.36
Ube2e3P52483 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.79□□□□□ -0.36
Ube2e3P52483 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.79□□□□□ -0.36
Ube2e3P52483 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ube2e3P52483 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms