Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
GdnfP48540 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.72□□□□□ -0.53
GdnfP48540 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.72□□□□□ -0.53
GdnfP48540 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.72□□□□□ -0.53
GdnfP48540 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
GdnfP48540 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
GdnfP48540 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.72□□□□□ -0.53
GdnfP48540 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
GdnfP48540 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.72□□□□□ -0.53
GdnfP48540 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Gm6888-201ENSMUST00000221983 706 ntBASIC11.72□□□□□ -0.53
GdnfP48540 Thoc7-209ENSMUST00000225325 765 ntBASIC11.72□□□□□ -0.53
GdnfP48540 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
GdnfP48540 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
GdnfP48540 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.72□□□□□ -0.53
GdnfP48540 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.72□□□□□ -0.53
GdnfP48540 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.72□□□□□ -0.53
GdnfP48540 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
GdnfP48540 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
GdnfP48540 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
GdnfP48540 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Syt7-205ENSMUST00000224135 1557 ntBASIC11.71□□□□□ -0.53
GdnfP48540 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
GdnfP48540 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
GdnfP48540 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.71□□□□□ -0.53
GdnfP48540 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
GdnfP48540 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
GdnfP48540 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
GdnfP48540 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.71□□□□□ -0.53
GdnfP48540 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.71□□□□□ -0.53
GdnfP48540 Mir6956-201ENSMUST00000183598 62 ntBASIC11.71□□□□□ -0.53
GdnfP48540 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.71□□□□□ -0.53
GdnfP48540 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.71□□□□□ -0.53
GdnfP48540 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.71□□□□□ -0.53
GdnfP48540 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
GdnfP48540 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.71□□□□□ -0.54
GdnfP48540 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
GdnfP48540 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
GdnfP48540 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
GdnfP48540 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
GdnfP48540 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
GdnfP48540 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
GdnfP48540 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
GdnfP48540 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
GdnfP48540 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
GdnfP48540 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.71□□□□□ -0.54
GdnfP48540 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
GdnfP48540 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
GdnfP48540 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
GdnfP48540 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
GdnfP48540 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
GdnfP48540 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
GdnfP48540 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
GdnfP48540 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms