Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm15393-201ENSMUST00000120499 219 ntBASIC12.56□□□□□ -0.4
Sox6P40645 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.56□□□□□ -0.4
Sox6P40645 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Sox6P40645 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox6P40645 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Gm27306-201ENSMUST00000183970 107 ntBASIC12.56□□□□□ -0.4
Sox6P40645 Mir8102-201ENSMUST00000184148 139 ntBASIC12.56□□□□□ -0.4
Sox6P40645 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox6P40645 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.56□□□□□ -0.4
Sox6P40645 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox6P40645 Gm9063-201ENSMUST00000223299 582 ntBASIC12.56□□□□□ -0.4
Sox6P40645 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Sox6P40645 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sox6P40645 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sox6P40645 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sox6P40645 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.55□□□□□ -0.4
Sox6P40645 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sox6P40645 Gm27989-201ENSMUST00000184721 107 ntBASIC12.55□□□□□ -0.4
Sox6P40645 Gm37714-201ENSMUST00000194742 342 ntBASIC12.55□□□□□ -0.4
Sox6P40645 Gm7775-201ENSMUST00000218871 853 ntBASIC12.55□□□□□ -0.4
Sox6P40645 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.55□□□□□ -0.4
Sox6P40645 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sox6P40645 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox6P40645 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox6P40645 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.54□□□□□ -0.4
Sox6P40645 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.54□□□□□ -0.4
Sox6P40645 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Gm14057-201ENSMUST00000120631 482 ntBASIC12.54□□□□□ -0.4
Sox6P40645 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.54□□□□□ -0.4
Sox6P40645 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox6P40645 Mir7684-201ENSMUST00000183858 60 ntBASIC12.54□□□□□ -0.4
Sox6P40645 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.54□□□□□ -0.4
Sox6P40645 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.54□□□□□ -0.4
Sox6P40645 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms