Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TfamP40630 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TfamP40630 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.95□□□□□ -0.34
TfamP40630 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TfamP40630 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TfamP40630 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.95□□□□□ -0.34
TfamP40630 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
TfamP40630 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.95□□□□□ -0.34
TfamP40630 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.95□□□□□ -0.34
TfamP40630 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TfamP40630 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.95□□□□□ -0.34
TfamP40630 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.95□□□□□ -0.34
TfamP40630 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TfamP40630 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TfamP40630 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TfamP40630 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TfamP40630 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.94□□□□□ -0.34
TfamP40630 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
TfamP40630 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.94□□□□□ -0.34
TfamP40630 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.94□□□□□ -0.34
TfamP40630 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.94□□□□□ -0.34
TfamP40630 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.94□□□□□ -0.34
TfamP40630 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
TfamP40630 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TfamP40630 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TfamP40630 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TfamP40630 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.93□□□□□ -0.34
TfamP40630 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.93□□□□□ -0.34
TfamP40630 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.93□□□□□ -0.34
TfamP40630 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TfamP40630 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Gm15678-201ENSMUST00000117573 960 ntBASIC12.93□□□□□ -0.34
TfamP40630 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.93□□□□□ -0.34
TfamP40630 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.93□□□□□ -0.34
TfamP40630 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TfamP40630 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms