Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.66□□□□□ -0.22
Cxcl12P40224 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.66□□□□□ -0.22
Cxcl12P40224 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.66□□□□□ -0.22
Cxcl12P40224 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.66□□□□□ -0.22
Cxcl12P40224 Gm27438-201ENSMUST00000183480 110 ntBASIC13.66□□□□□ -0.22
Cxcl12P40224 Gm8885-201ENSMUST00000189382 598 ntBASIC13.66□□□□□ -0.22
Cxcl12P40224 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.66□□□□□ -0.22
Cxcl12P40224 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl12P40224 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cxcl12P40224 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.66□□□□□ -0.22
Cxcl12P40224 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.66□□□□□ -0.22
Cxcl12P40224 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.65□□□□□ -0.22
Cxcl12P40224 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.65□□□□□ -0.22
Cxcl12P40224 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Cxcl12P40224 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.65□□□□□ -0.22
Cxcl12P40224 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl12P40224 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl12P40224 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.65□□□□□ -0.22
Cxcl12P40224 Gm44651-201ENSMUST00000207343 372 ntBASIC13.65□□□□□ -0.22
Cxcl12P40224 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.65□□□□□ -0.22
Cxcl12P40224 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Cxcl12P40224 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.65□□□□□ -0.22
Cxcl12P40224 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Cxcl12P40224 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.65□□□□□ -0.22
Cxcl12P40224 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cxcl12P40224 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
Cxcl12P40224 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cxcl12P40224 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cxcl12P40224 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cxcl12P40224 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.64□□□□□ -0.23
Cxcl12P40224 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.64□□□□□ -0.23
Cxcl12P40224 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.64□□□□□ -0.23
Cxcl12P40224 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cxcl12P40224 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl12P40224 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.64□□□□□ -0.23
Cxcl12P40224 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.64□□□□□ -0.23
Cxcl12P40224 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl12P40224 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl12P40224 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.64□□□□□ -0.23
Cxcl12P40224 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl12P40224 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cxcl12P40224 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl12P40224 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl12P40224 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl12P40224 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl12P40224 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms