Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd1P40201 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chd1P40201 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Chd1P40201 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd1P40201 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd1P40201 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Chd1P40201 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chd1P40201 Gm5733-201ENSMUST00000190232 939 ntBASIC19.58■□□□□ 0.72
Chd1P40201 Gm9132-201ENSMUST00000210182 832 ntBASIC19.58■□□□□ 0.72
Chd1P40201 Arhgef33-207ENSMUST00000224966 490 ntBASIC19.58■□□□□ 0.72
Chd1P40201 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chd1P40201 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Chd1P40201 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Chd1P40201 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Chd1P40201 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chd1P40201 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chd1P40201 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd1P40201 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Chd1P40201 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC19.57■□□□□ 0.72
Chd1P40201 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd1P40201 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd1P40201 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC19.57■□□□□ 0.72
Chd1P40201 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd1P40201 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chd1P40201 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd1P40201 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd1P40201 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Chd1P40201 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chd1P40201 Gm13668-201ENSMUST00000119237 1001 ntBASIC19.56■□□□□ 0.72
Chd1P40201 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC19.56■□□□□ 0.72
Chd1P40201 Gm5852-201ENSMUST00000194119 1021 ntBASIC19.56■□□□□ 0.72
Chd1P40201 Gm5542-201ENSMUST00000195485 1089 ntBASIC19.56■□□□□ 0.72
Chd1P40201 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Chd1P40201 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Chd1P40201 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Chd1P40201 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.56■□□□□ 0.72
Chd1P40201 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Chd1P40201 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Gm23771-201ENSMUST00000178702 110 ntBASIC19.56■□□□□ 0.72
Chd1P40201 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC19.56■□□□□ 0.72
Chd1P40201 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chd1P40201 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Chd1P40201 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd1P40201 Gm44094-201ENSMUST00000204703 2030 ntBASIC19.55■□□□□ 0.72
Chd1P40201 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC19.55■□□□□ 0.72
Chd1P40201 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC19.55■□□□□ 0.72
Chd1P40201 Gm28324-201ENSMUST00000187913 264 ntBASIC19.55■□□□□ 0.72
Chd1P40201 Gm43610-201ENSMUST00000199117 365 ntBASIC19.55■□□□□ 0.72
Chd1P40201 Gm5455-201ENSMUST00000058710 715 ntBASIC19.55■□□□□ 0.72
Chd1P40201 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd1P40201 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Chd1P40201 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chd1P40201 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC19.54■□□□□ 0.72
Chd1P40201 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Gm11509-201ENSMUST00000117358 325 ntBASIC19.54■□□□□ 0.72
Chd1P40201 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC19.54■□□□□ 0.72
Chd1P40201 Cd63-ps-202ENSMUST00000154992 717 ntBASIC19.54■□□□□ 0.72
Chd1P40201 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Chd1P40201 Gm3332-201ENSMUST00000189337 928 ntBASIC19.54■□□□□ 0.72
Chd1P40201 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 AC140375.1-201ENSMUST00000225421 694 ntBASIC19.54■□□□□ 0.72
Chd1P40201 AC154184.3-201ENSMUST00000225620 1090 ntBASIC19.54■□□□□ 0.72
Chd1P40201 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC19.54■□□□□ 0.72
Chd1P40201 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC19.54■□□□□ 0.72
Chd1P40201 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1P40201 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Chd1P40201 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC19.54■□□□□ 0.72
Chd1P40201 Gm11354-201ENSMUST00000121974 422 ntBASIC19.54■□□□□ 0.72
Chd1P40201 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC19.54■□□□□ 0.72
Chd1P40201 Gm18159-201ENSMUST00000174516 1070 ntBASIC19.54■□□□□ 0.72
Chd1P40201 Mir8115-201ENSMUST00000184992 119 ntBASIC19.54■□□□□ 0.72
Chd1P40201 Gm19931-201ENSMUST00000198920 368 ntBASIC19.54■□□□□ 0.72
Chd1P40201 Gm9111-201ENSMUST00000219394 709 ntBASIC19.54■□□□□ 0.72
Chd1P40201 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC19.54■□□□□ 0.72
Chd1P40201 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1P40201 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chd1P40201 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms