Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
HmgclP38060 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HmgclP38060 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HmgclP38060 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HmgclP38060 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HmgclP38060 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.17□□□□□ -0.3
HmgclP38060 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HmgclP38060 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.17□□□□□ -0.3
HmgclP38060 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HmgclP38060 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HmgclP38060 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HmgclP38060 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.17□□□□□ -0.3
HmgclP38060 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HmgclP38060 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HmgclP38060 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.16□□□□□ -0.3
HmgclP38060 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Gm14928-201ENSMUST00000120198 477 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HmgclP38060 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HmgclP38060 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.16□□□□□ -0.3
HmgclP38060 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.16□□□□□ -0.3
HmgclP38060 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.16□□□□□ -0.3
HmgclP38060 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.16□□□□□ -0.3
HmgclP38060 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.16□□□□□ -0.3
HmgclP38060 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.16□□□□□ -0.3
HmgclP38060 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Gm6180-201ENSMUST00000065243 498 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.16□□□□□ -0.3
HmgclP38060 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
HmgclP38060 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HmgclP38060 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HmgclP38060 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
HmgclP38060 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.16□□□□□ -0.3
HmgclP38060 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.16□□□□□ -0.3
HmgclP38060 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HmgclP38060 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.15□□□□□ -0.3
HmgclP38060 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.15□□□□□ -0.3
HmgclP38060 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Gm6447-201ENSMUST00000118905 835 ntBASIC13.15□□□□□ -0.3
HmgclP38060 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.15□□□□□ -0.3
HmgclP38060 Gm12091-201ENSMUST00000146791 830 ntBASIC13.15□□□□□ -0.3
HmgclP38060 Gm28911-201ENSMUST00000188837 117 ntBASIC13.15□□□□□ -0.3
HmgclP38060 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.15□□□□□ -0.3
HmgclP38060 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
HmgclP38060 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HmgclP38060 Itm2b-204ENSMUST00000228637 783 ntBASIC13.15□□□□□ -0.3
HmgclP38060 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
HmgclP38060 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.15□□□□□ -0.3
HmgclP38060 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.15□□□□□ -0.3
HmgclP38060 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HmgclP38060 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.15□□□□□ -0.3
HmgclP38060 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms