Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.31□□□□□ -0.28
LdlrP35951 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.31□□□□□ -0.28
LdlrP35951 Gm22189-201ENSMUST00000103822 86 ntBASIC13.31□□□□□ -0.28
LdlrP35951 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.31□□□□□ -0.28
LdlrP35951 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Gm33320-201ENSMUST00000192232 530 ntBASIC13.31□□□□□ -0.28
LdlrP35951 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.31□□□□□ -0.28
LdlrP35951 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LdlrP35951 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
LdlrP35951 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LdlrP35951 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LdlrP35951 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.3□□□□□ -0.28
LdlrP35951 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LdlrP35951 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
LdlrP35951 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LdlrP35951 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LdlrP35951 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LdlrP35951 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.3□□□□□ -0.28
LdlrP35951 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.3□□□□□ -0.28
LdlrP35951 Gm23984-201ENSMUST00000157139 203 ntBASIC13.3□□□□□ -0.28
LdlrP35951 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Gm8927-201ENSMUST00000181978 981 ntBASIC13.3□□□□□ -0.28
LdlrP35951 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.3□□□□□ -0.28
LdlrP35951 Gm45384-201ENSMUST00000210451 277 ntBASIC13.3□□□□□ -0.28
LdlrP35951 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Gm3222-201ENSMUST00000071282 990 ntBASIC13.3□□□□□ -0.28
LdlrP35951 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
LdlrP35951 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.3□□□□□ -0.28
LdlrP35951 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.3□□□□□ -0.28
LdlrP35951 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.3□□□□□ -0.28
LdlrP35951 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LdlrP35951 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
LdlrP35951 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.29□□□□□ -0.28
LdlrP35951 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.29□□□□□ -0.28
LdlrP35951 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Gm11478-201ENSMUST00000117851 599 ntBASIC13.29□□□□□ -0.28
LdlrP35951 Gm15653-201ENSMUST00000119247 907 ntBASIC13.29□□□□□ -0.28
LdlrP35951 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LdlrP35951 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms