Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Slc6a13P31649 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
Slc6a13P31649 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Slc6a13P31649 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Slc6a13P31649 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.54□□□□□ -0.24
Slc6a13P31649 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.54□□□□□ -0.24
Slc6a13P31649 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.54□□□□□ -0.24
Slc6a13P31649 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.54□□□□□ -0.24
Slc6a13P31649 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.54□□□□□ -0.24
Slc6a13P31649 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Slc6a13P31649 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Slc6a13P31649 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Slc6a13P31649 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a13P31649 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Slc6a13P31649 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.53□□□□□ -0.24
Slc6a13P31649 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Slc6a13P31649 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Slc6a13P31649 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Slc6a13P31649 Gm5687-201ENSMUST00000118252 640 ntBASIC13.53□□□□□ -0.24
Slc6a13P31649 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.53□□□□□ -0.24
Slc6a13P31649 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.53□□□□□ -0.24
Slc6a13P31649 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.53□□□□□ -0.24
Slc6a13P31649 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a13P31649 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Slc6a13P31649 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a13P31649 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.52□□□□□ -0.24
Slc6a13P31649 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a13P31649 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a13P31649 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a13P31649 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.52□□□□□ -0.24
Slc6a13P31649 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Slc6a13P31649 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.52□□□□□ -0.25
Slc6a13P31649 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.52□□□□□ -0.25
Slc6a13P31649 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a13P31649 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.52□□□□□ -0.25
Slc6a13P31649 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.52□□□□□ -0.25
Slc6a13P31649 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Slc6a13P31649 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.52□□□□□ -0.25
Slc6a13P31649 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Slc6a13P31649 Gm7653-201ENSMUST00000214567 508 ntBASIC13.52□□□□□ -0.25
Slc6a13P31649 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.52□□□□□ -0.25
Slc6a13P31649 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a13P31649 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a13P31649 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.52□□□□□ -0.25
Slc6a13P31649 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a13P31649 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a13P31649 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Slc6a13P31649 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.52□□□□□ -0.25
Slc6a13P31649 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a13P31649 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.52□□□□□ -0.25
Slc6a13P31649 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a13P31649 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a13P31649 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Slc6a13P31649 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a13P31649 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Slc6a13P31649 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Slc6a13P31649 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Slc6a13P31649 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms