Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
BrafP28028 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BrafP28028 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BrafP28028 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BrafP28028 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.09□□□□□ -0.31
BrafP28028 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BrafP28028 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
BrafP28028 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BrafP28028 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
BrafP28028 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
BrafP28028 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
BrafP28028 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BrafP28028 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BrafP28028 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
BrafP28028 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.08□□□□□ -0.32
BrafP28028 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
BrafP28028 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.08□□□□□ -0.32
BrafP28028 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.08□□□□□ -0.32
BrafP28028 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.08□□□□□ -0.32
BrafP28028 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.08□□□□□ -0.32
BrafP28028 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.08□□□□□ -0.32
BrafP28028 Gm8927-201ENSMUST00000181978 981 ntBASIC13.08□□□□□ -0.32
BrafP28028 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.08□□□□□ -0.32
BrafP28028 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.08□□□□□ -0.32
BrafP28028 Gm7775-201ENSMUST00000218871 853 ntBASIC13.08□□□□□ -0.32
BrafP28028 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Gm3222-201ENSMUST00000071282 990 ntBASIC13.08□□□□□ -0.32
BrafP28028 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
BrafP28028 Mir497b-201ENSMUST00000093601 125 ntBASIC13.08□□□□□ -0.32
BrafP28028 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
BrafP28028 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.08□□□□□ -0.32
BrafP28028 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.08□□□□□ -0.32
BrafP28028 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
BrafP28028 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
BrafP28028 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BrafP28028 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BrafP28028 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BrafP28028 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BrafP28028 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Gm4875-201ENSMUST00000118257 786 ntBASIC13.07□□□□□ -0.32
BrafP28028 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.07□□□□□ -0.32
BrafP28028 Gm13385-201ENSMUST00000121089 220 ntBASIC13.07□□□□□ -0.32
BrafP28028 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.07□□□□□ -0.32
BrafP28028 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.07□□□□□ -0.32
BrafP28028 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
BrafP28028 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
BrafP28028 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.07□□□□□ -0.32
BrafP28028 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BrafP28028 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
BrafP28028 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BrafP28028 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
BrafP28028 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms