Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.21□□□□□ -0.61
Tnfrsf1aP25118 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Tnfrsf1aP25118 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Mir874-201ENSMUST00000104769 76 ntBASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Gm27989-201ENSMUST00000184721 107 ntBASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tnfrsf1aP25118 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Gm27306-201ENSMUST00000183970 107 ntBASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Gm20445-201ENSMUST00000061905 565 ntBASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms