Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm22175-201ENSMUST00000175007 78 ntBASIC12.84□□□□□ -0.35
BdnfP21237 Gm27430-201ENSMUST00000184585 107 ntBASIC12.84□□□□□ -0.35
BdnfP21237 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
BdnfP21237 Gm44333-201ENSMUST00000197168 107 ntBASIC12.84□□□□□ -0.35
BdnfP21237 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.84□□□□□ -0.35
BdnfP21237 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.84□□□□□ -0.35
BdnfP21237 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
BdnfP21237 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.84□□□□□ -0.35
BdnfP21237 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.84□□□□□ -0.35
BdnfP21237 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
BdnfP21237 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.84□□□□□ -0.35
BdnfP21237 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
BdnfP21237 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BdnfP21237 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
BdnfP21237 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
BdnfP21237 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
BdnfP21237 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.83□□□□□ -0.36
BdnfP21237 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
BdnfP21237 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
BdnfP21237 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.83□□□□□ -0.36
BdnfP21237 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Gm25144-201ENSMUST00000179561 110 ntBASIC12.83□□□□□ -0.36
BdnfP21237 Gm25352-201ENSMUST00000179815 110 ntBASIC12.83□□□□□ -0.36
BdnfP21237 Gm8927-201ENSMUST00000181978 981 ntBASIC12.83□□□□□ -0.36
BdnfP21237 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
BdnfP21237 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.83□□□□□ -0.36
BdnfP21237 Gm6888-201ENSMUST00000221983 706 ntBASIC12.83□□□□□ -0.36
BdnfP21237 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Gm3222-201ENSMUST00000071282 990 ntBASIC12.83□□□□□ -0.36
BdnfP21237 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
BdnfP21237 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BdnfP21237 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
BdnfP21237 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.82□□□□□ -0.36
BdnfP21237 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
BdnfP21237 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.82□□□□□ -0.36
BdnfP21237 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.82□□□□□ -0.36
BdnfP21237 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.82□□□□□ -0.36
BdnfP21237 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.82□□□□□ -0.36
BdnfP21237 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
BdnfP21237 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Gm17837-201ENSMUST00000186435 985 ntBASIC12.82□□□□□ -0.36
BdnfP21237 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.82□□□□□ -0.36
BdnfP21237 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.82□□□□□ -0.36
BdnfP21237 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.82□□□□□ -0.36
BdnfP21237 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
BdnfP21237 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
BdnfP21237 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.82□□□□□ -0.36
BdnfP21237 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.82□□□□□ -0.36
BdnfP21237 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BdnfP21237 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms