Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.6□□□□□ -0.39
TP20293 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.6□□□□□ -0.39
TP20293 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TP20293 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.6□□□□□ -0.39
TP20293 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.6□□□□□ -0.39
TP20293 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.6□□□□□ -0.39
TP20293 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.6□□□□□ -0.39
TP20293 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.6□□□□□ -0.39
TP20293 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TP20293 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
TP20293 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.6□□□□□ -0.39
TP20293 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.6□□□□□ -0.39
TP20293 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
TP20293 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TP20293 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TP20293 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TP20293 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TP20293 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.59□□□□□ -0.39
TP20293 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.59□□□□□ -0.39
TP20293 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TP20293 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.59□□□□□ -0.39
TP20293 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.59□□□□□ -0.39
TP20293 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TP20293 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Gm28631-201ENSMUST00000190740 334 ntBASIC12.59□□□□□ -0.39
TP20293 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.59□□□□□ -0.39
TP20293 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Gm19220-201ENSMUST00000222682 803 ntBASIC12.59□□□□□ -0.39
TP20293 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.59□□□□□ -0.39
TP20293 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
TP20293 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.59□□□□□ -0.39
TP20293 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TP20293 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.59□□□□□ -0.39
TP20293 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TP20293 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TP20293 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
TP20293 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TP20293 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TP20293 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TP20293 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.58□□□□□ -0.4
TP20293 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
TP20293 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.58□□□□□ -0.4
TP20293 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TP20293 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
TP20293 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
TP20293 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TP20293 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms