Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccl3P10855 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccl3P10855 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccl3P10855 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccl3P10855 Gm13316-201ENSMUST00000140537 691 ntBASIC11.73□□□□□ -0.53
Ccl3P10855 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccl3P10855 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccl3P10855 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccl3P10855 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccl3P10855 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ccl3P10855 Gm18753-201ENSMUST00000201000 566 ntBASIC11.73□□□□□ -0.53
Ccl3P10855 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.73□□□□□ -0.53
Ccl3P10855 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccl3P10855 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.73□□□□□ -0.53
Ccl3P10855 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccl3P10855 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.73□□□□□ -0.53
Ccl3P10855 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccl3P10855 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccl3P10855 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Ccl3P10855 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl3P10855 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccl3P10855 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccl3P10855 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Ccl3P10855 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.72□□□□□ -0.53
Ccl3P10855 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.72□□□□□ -0.53
Ccl3P10855 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.72□□□□□ -0.53
Ccl3P10855 Gm12502-201ENSMUST00000120197 444 ntBASIC11.72□□□□□ -0.53
Ccl3P10855 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccl3P10855 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccl3P10855 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccl3P10855 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccl3P10855 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.72□□□□□ -0.53
Ccl3P10855 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.72□□□□□ -0.53
Ccl3P10855 Gm5363-201ENSMUST00000211927 938 ntBASIC11.72□□□□□ -0.53
Ccl3P10855 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.72□□□□□ -0.53
Ccl3P10855 Gm32025-201ENSMUST00000217960 307 ntBASIC11.72□□□□□ -0.53
Ccl3P10855 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccl3P10855 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccl3P10855 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccl3P10855 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccl3P10855 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccl3P10855 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccl3P10855 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.72□□□□□ -0.53
Ccl3P10855 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl3P10855 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.71□□□□□ -0.53
Ccl3P10855 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms