Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Gm11524-201ENSMUST00000119349 807 ntBASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Gm8515-201ENSMUST00000194852 576 ntBASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Gm19078-201ENSMUST00000206311 727 ntBASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Gm18307-201ENSMUST00000206864 949 ntBASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Gm45668-201ENSMUST00000211271 493 ntBASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Gm6180-201ENSMUST00000065243 498 ntBASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Gm15376-201ENSMUST00000122258 783 ntBASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.55□□□□□ -0.08
Chmp6P0C0A3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp6P0C0A3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.54□□□□□ -0.08
Chmp6P0C0A3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Gm11424-201ENSMUST00000121929 829 ntBASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Gm9908-201ENSMUST00000211534 448 ntBASIC14.54□□□□□ -0.08
Chmp6P0C0A3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Chmp6P0C0A3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms