Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sod1P08228 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.45□□□□□ -0.42
Sod1P08228 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Sod1P08228 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.45□□□□□ -0.42
Sod1P08228 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sod1P08228 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sod1P08228 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.45□□□□□ -0.42
Sod1P08228 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.45□□□□□ -0.42
Sod1P08228 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.45□□□□□ -0.42
Sod1P08228 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.45□□□□□ -0.42
Sod1P08228 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.45□□□□□ -0.42
Sod1P08228 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.45□□□□□ -0.42
Sod1P08228 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sod1P08228 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.45□□□□□ -0.42
Sod1P08228 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.45□□□□□ -0.42
Sod1P08228 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Sod1P08228 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.45□□□□□ -0.42
Sod1P08228 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sod1P08228 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Gm24830-201ENSMUST00000102024 166 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.44□□□□□ -0.42
Sod1P08228 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Gm25890-201ENSMUST00000177643 165 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Gm22614-201ENSMUST00000178300 165 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Mir7070-201ENSMUST00000183657 86 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Mir7221-201ENSMUST00000184009 72 ntBASIC12.44□□□□□ -0.42
Sod1P08228 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.44□□□□□ -0.42
Sod1P08228 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.44□□□□□ -0.42
Sod1P08228 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Gm8099-201ENSMUST00000200510 742 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.44□□□□□ -0.42
Sod1P08228 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.44□□□□□ -0.42
Sod1P08228 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Gm22042-201ENSMUST00000082989 165 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Gm26232-201ENSMUST00000083360 166 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Gm24136-201ENSMUST00000083374 165 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Gm26110-201ENSMUST00000083971 165 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sod1P08228 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Sod1P08228 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Sod1P08228 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sod1P08228 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.44□□□□□ -0.42
Sod1P08228 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sod1P08228 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sod1P08228 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sod1P08228 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sod1P08228 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sod1P08228 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sod1P08228 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sod1P08228 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sod1P08228 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms