Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col4a2P08122 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a2P08122 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.19□□□□□ -0.46
Col4a2P08122 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.19□□□□□ -0.46
Col4a2P08122 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col4a2P08122 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Col4a2P08122 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Gm23200-201ENSMUST00000104379 132 ntBASIC12.18□□□□□ -0.46
Col4a2P08122 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Gm14263-201ENSMUST00000117955 746 ntBASIC12.18□□□□□ -0.46
Col4a2P08122 Gm13492-201ENSMUST00000119772 665 ntBASIC12.18□□□□□ -0.46
Col4a2P08122 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.18□□□□□ -0.46
Col4a2P08122 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.18□□□□□ -0.46
Col4a2P08122 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.18□□□□□ -0.46
Col4a2P08122 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Col4a2P08122 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.18□□□□□ -0.46
Col4a2P08122 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col4a2P08122 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.18□□□□□ -0.46
Col4a2P08122 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a2P08122 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.17□□□□□ -0.46
Col4a2P08122 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Col4a2P08122 Gm2546-201ENSMUST00000182630 991 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.17□□□□□ -0.46
Col4a2P08122 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Gm44967-201ENSMUST00000207047 631 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Gm19208-201ENSMUST00000213861 912 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.17□□□□□ -0.46
Col4a2P08122 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Col4a2P08122 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.17□□□□□ -0.46
Col4a2P08122 Gm13875-201ENSMUST00000120162 282 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.17□□□□□ -0.46
Col4a2P08122 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Col4a2P08122 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Gm3096-201ENSMUST00000185770 364 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.17□□□□□ -0.46
Col4a2P08122 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a2P08122 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a2P08122 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.16□□□□□ -0.46
Col4a2P08122 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a2P08122 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col4a2P08122 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms