Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.81□□□□□ -0.36
P04213 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.81□□□□□ -0.36
P04213 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.81□□□□□ -0.36
P04213 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.81□□□□□ -0.36
P04213 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P04213 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.81□□□□□ -0.36
P04213 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.81□□□□□ -0.36
P04213 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
P04213 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P04213 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
P04213 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.81□□□□□ -0.36
P04213 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
P04213 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04213 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
P04213 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P04213 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.8□□□□□ -0.36
P04213 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.8□□□□□ -0.36
P04213 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.8□□□□□ -0.36
P04213 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04213 Mir7221-201ENSMUST00000184009 72 ntBASIC12.8□□□□□ -0.36
P04213 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.8□□□□□ -0.36
P04213 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.8□□□□□ -0.36
P04213 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.8□□□□□ -0.36
P04213 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04213 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04213 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04213 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
P04213 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P04213 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.79□□□□□ -0.36
P04213 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P04213 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.79□□□□□ -0.36
P04213 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
P04213 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P04213 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P04213 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.79□□□□□ -0.36
P04213 Gm13689-201ENSMUST00000119360 685 ntBASIC12.79□□□□□ -0.36
P04213 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.79□□□□□ -0.36
P04213 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
P04213 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.79□□□□□ -0.36
P04213 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.79□□□□□ -0.36
P04213 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.79□□□□□ -0.36
P04213 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.79□□□□□ -0.36
P04213 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
P04213 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P04213 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms