Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
ClppO88696 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.11□□□□□ -0.31
ClppO88696 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.11□□□□□ -0.31
ClppO88696 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.11□□□□□ -0.31
ClppO88696 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClppO88696 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
ClppO88696 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ClppO88696 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
ClppO88696 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.1□□□□□ -0.31
ClppO88696 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.1□□□□□ -0.31
ClppO88696 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.1□□□□□ -0.31
ClppO88696 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ClppO88696 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.1□□□□□ -0.31
ClppO88696 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.1□□□□□ -0.31
ClppO88696 Gm6244-201ENSMUST00000178732 841 ntBASIC13.1□□□□□ -0.31
ClppO88696 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ClppO88696 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.1□□□□□ -0.31
ClppO88696 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.1□□□□□ -0.31
ClppO88696 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ClppO88696 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ClppO88696 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.1□□□□□ -0.31
ClppO88696 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.1□□□□□ -0.31
ClppO88696 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ClppO88696 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.1□□□□□ -0.31
ClppO88696 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.1□□□□□ -0.31
ClppO88696 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.1□□□□□ -0.31
ClppO88696 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClppO88696 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.09□□□□□ -0.31
ClppO88696 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.09□□□□□ -0.31
ClppO88696 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
ClppO88696 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Gm26464-201ENSMUST00000157094 305 ntBASIC13.09□□□□□ -0.31
ClppO88696 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ClppO88696 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.09□□□□□ -0.31
ClppO88696 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ClppO88696 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ClppO88696 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClppO88696 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ClppO88696 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ClppO88696 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
ClppO88696 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.08□□□□□ -0.32
ClppO88696 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.08□□□□□ -0.32
ClppO88696 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms