Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Vti1bO88384 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vti1bO88384 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1bO88384 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Vti1bO88384 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Vti1bO88384 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.75□□□□□ -0.37
Vti1bO88384 Gm4875-201ENSMUST00000118257 786 ntBASIC12.75□□□□□ -0.37
Vti1bO88384 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.75□□□□□ -0.37
Vti1bO88384 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.75□□□□□ -0.37
Vti1bO88384 Auts2-212ENSMUST00000178555 309 ntBASIC12.75□□□□□ -0.37
Vti1bO88384 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.75□□□□□ -0.37
Vti1bO88384 Mir7684-201ENSMUST00000183858 60 ntBASIC12.75□□□□□ -0.37
Vti1bO88384 Mir8102-201ENSMUST00000184148 139 ntBASIC12.75□□□□□ -0.37
Vti1bO88384 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Vti1bO88384 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.75□□□□□ -0.37
Vti1bO88384 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Gm20949-201ENSMUST00000206478 952 ntBASIC12.75□□□□□ -0.37
Vti1bO88384 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.75□□□□□ -0.37
Vti1bO88384 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.75□□□□□ -0.37
Vti1bO88384 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.75□□□□□ -0.37
Vti1bO88384 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1bO88384 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.74□□□□□ -0.37
Vti1bO88384 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vti1bO88384 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Vti1bO88384 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vti1bO88384 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Vti1bO88384 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.74□□□□□ -0.37
Vti1bO88384 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.74□□□□□ -0.37
Vti1bO88384 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.74□□□□□ -0.37
Vti1bO88384 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.74□□□□□ -0.37
Vti1bO88384 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.74□□□□□ -0.37
Vti1bO88384 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Vti1bO88384 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Vti1bO88384 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.74□□□□□ -0.37
Vti1bO88384 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vti1bO88384 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vti1bO88384 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vti1bO88384 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms