Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm19994-201ENSMUST00000217086 586 ntBASIC17■□□□□ 0.31
Ubr1O70481 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Ubr1O70481 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Ubr1O70481 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ubr1O70481 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC17■□□□□ 0.31
Ubr1O70481 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC17■□□□□ 0.31
Ubr1O70481 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC17■□□□□ 0.31
Ubr1O70481 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17■□□□□ 0.31
Ubr1O70481 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ubr1O70481 Gm8385-201ENSMUST00000058999 643 ntBASIC17■□□□□ 0.31
Ubr1O70481 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ubr1O70481 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Ubr1O70481 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Ubr1O70481 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ubr1O70481 Gm24749-201ENSMUST00000157838 343 ntBASIC16.99■□□□□ 0.31
Ubr1O70481 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.99■□□□□ 0.31
Ubr1O70481 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ubr1O70481 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Ubr1O70481 Gm14277-201ENSMUST00000121195 360 ntBASIC16.98■□□□□ 0.31
Ubr1O70481 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.98■□□□□ 0.31
Ubr1O70481 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ubr1O70481 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.98■□□□□ 0.31
Ubr1O70481 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Ubr1O70481 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.98■□□□□ 0.31
Ubr1O70481 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.98■□□□□ 0.31
Ubr1O70481 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ubr1O70481 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ubr1O70481 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ubr1O70481 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.97■□□□□ 0.31
Ubr1O70481 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ubr1O70481 Gm13315-201ENSMUST00000120376 991 ntBASIC16.97■□□□□ 0.31
Ubr1O70481 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Mir5120-201ENSMUST00000175020 78 ntBASIC16.97■□□□□ 0.31
Ubr1O70481 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.97■□□□□ 0.31
Ubr1O70481 Gm44405-201ENSMUST00000198952 126 ntBASIC16.97■□□□□ 0.31
Ubr1O70481 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.97■□□□□ 0.31
Ubr1O70481 Gm8913-201ENSMUST00000209491 641 ntBASIC16.97■□□□□ 0.31
Ubr1O70481 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.97■□□□□ 0.31
Ubr1O70481 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ubr1O70481 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ubr1O70481 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms