Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.55□□□□□ -0.24
Limk2O54785 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.55□□□□□ -0.24
Limk2O54785 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Limk2O54785 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.55□□□□□ -0.24
Limk2O54785 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Gm12928-201ENSMUST00000117115 573 ntBASIC13.55□□□□□ -0.24
Limk2O54785 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Gm13392-201ENSMUST00000117708 150 ntBASIC13.55□□□□□ -0.24
Limk2O54785 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.55□□□□□ -0.24
Limk2O54785 Gm17420-201ENSMUST00000164753 153 ntBASIC13.55□□□□□ -0.24
Limk2O54785 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Limk2O54785 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Limk2O54785 Gm44397-201ENSMUST00000195950 113 ntBASIC13.55□□□□□ -0.24
Limk2O54785 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Limk2O54785 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Gm10478-201ENSMUST00000084451 396 ntBASIC13.55□□□□□ -0.24
Limk2O54785 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Limk2O54785 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Limk2O54785 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Limk2O54785 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Limk2O54785 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.55□□□□□ -0.24
Limk2O54785 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Limk2O54785 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Limk2O54785 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Limk2O54785 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Limk2O54785 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.54□□□□□ -0.24
Limk2O54785 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Limk2O54785 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.54□□□□□ -0.24
Limk2O54785 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.54□□□□□ -0.24
Limk2O54785 Gm27847-201ENSMUST00000183711 107 ntBASIC13.54□□□□□ -0.24
Limk2O54785 Gm27375-201ENSMUST00000183799 107 ntBASIC13.54□□□□□ -0.24
Limk2O54785 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.54□□□□□ -0.24
Limk2O54785 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.54□□□□□ -0.24
Limk2O54785 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.54□□□□□ -0.24
Limk2O54785 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.54□□□□□ -0.24
Limk2O54785 Gm26315-201ENSMUST00000083890 321 ntBASIC13.54□□□□□ -0.24
Limk2O54785 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Limk2O54785 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.54□□□□□ -0.24
Limk2O54785 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.54□□□□□ -0.24
Limk2O54785 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.54□□□□□ -0.24
Limk2O54785 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.54□□□□□ -0.24
Limk2O54785 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.54□□□□□ -0.24
Limk2O54785 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Limk2O54785 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.54□□□□□ -0.24
Limk2O54785 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.54□□□□□ -0.24
Limk2O54785 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Limk2O54785 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.53□□□□□ -0.24
Limk2O54785 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Limk2O54785 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Limk2O54785 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limk2O54785 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Limk2O54785 Gm14660-201ENSMUST00000119809 575 ntBASIC13.53□□□□□ -0.24
Limk2O54785 Gm8062-201ENSMUST00000139696 444 ntBASIC13.53□□□□□ -0.24
Limk2O54785 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.53□□□□□ -0.24
Limk2O54785 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms