Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Npc1O35604 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Npc1O35604 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Npc1O35604 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Npc1O35604 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Npc1O35604 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Npc1O35604 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.04□□□□□ -0.32
Npc1O35604 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Npc1O35604 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.04□□□□□ -0.32
Npc1O35604 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.04□□□□□ -0.32
Npc1O35604 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Npc1O35604 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Npc1O35604 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.04□□□□□ -0.32
Npc1O35604 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Npc1O35604 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Npc1O35604 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.04□□□□□ -0.32
Npc1O35604 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Npc1O35604 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.04□□□□□ -0.32
Npc1O35604 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Npc1O35604 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.03□□□□□ -0.32
Npc1O35604 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.03□□□□□ -0.32
Npc1O35604 Gm13689-201ENSMUST00000119360 685 ntBASIC13.03□□□□□ -0.32
Npc1O35604 Gm11814-201ENSMUST00000119515 929 ntBASIC13.03□□□□□ -0.32
Npc1O35604 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Npc1O35604 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.03□□□□□ -0.32
Npc1O35604 Gm27486-201ENSMUST00000184923 80 ntBASIC13.03□□□□□ -0.32
Npc1O35604 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.03□□□□□ -0.32
Npc1O35604 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Gm5035-201ENSMUST00000215581 927 ntBASIC13.03□□□□□ -0.32
Npc1O35604 Gm18473-201ENSMUST00000220543 868 ntBASIC13.03□□□□□ -0.32
Npc1O35604 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Npc1O35604 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Npc1O35604 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Npc1O35604 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Npc1O35604 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npc1O35604 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Npc1O35604 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npc1O35604 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Npc1O35604 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npc1O35604 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npc1O35604 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.02□□□□□ -0.32
Npc1O35604 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Npc1O35604 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.02□□□□□ -0.33
Npc1O35604 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Npc1O35604 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.02□□□□□ -0.33
Npc1O35604 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Gm17150-201ENSMUST00000165577 381 ntBASIC13.02□□□□□ -0.33
Npc1O35604 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.02□□□□□ -0.33
Npc1O35604 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.02□□□□□ -0.33
Npc1O35604 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.02□□□□□ -0.33
Npc1O35604 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.02□□□□□ -0.33
Npc1O35604 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.02□□□□□ -0.33
Npc1O35604 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms