Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk2O35491 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk2O35491 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Clk2O35491 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.46□□□□□ -0.1
Clk2O35491 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk2O35491 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk2O35491 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk2O35491 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk2O35491 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk2O35491 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Gm25261-201ENSMUST00000157416 134 ntBASIC14.45□□□□□ -0.1
Clk2O35491 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Gm27572-201ENSMUST00000183702 255 ntBASIC14.45□□□□□ -0.1
Clk2O35491 Mir7221-201ENSMUST00000184009 72 ntBASIC14.45□□□□□ -0.1
Clk2O35491 Gm19184-201ENSMUST00000196798 928 ntBASIC14.45□□□□□ -0.1
Clk2O35491 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.45□□□□□ -0.1
Clk2O35491 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.45□□□□□ -0.1
Clk2O35491 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.45□□□□□ -0.1
Clk2O35491 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clk2O35491 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.45□□□□□ -0.1
Clk2O35491 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk2O35491 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Clk2O35491 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Clk2O35491 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.44□□□□□ -0.1
Clk2O35491 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.44□□□□□ -0.1
Clk2O35491 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.44□□□□□ -0.1
Clk2O35491 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Clk2O35491 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Gm25927-201ENSMUST00000175058 117 ntBASIC14.44□□□□□ -0.1
Clk2O35491 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.44□□□□□ -0.1
Clk2O35491 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clk2O35491 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clk2O35491 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk2O35491 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.43□□□□□ -0.1
Clk2O35491 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.43□□□□□ -0.1
Clk2O35491 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk2O35491 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms