Protein–RNA interactions for Protein: J3QMK2

Bbip1, BBSome-interacting protein 1, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbip1J3QMK2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Bbip1J3QMK2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Bbip1J3QMK2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bbip1J3QMK2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Gm15678-201ENSMUST00000117573 960 ntBASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Gm5161-201ENSMUST00000075243 853 ntBASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bbip1J3QMK2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Bbip1J3QMK2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Bbip1J3QMK2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Bbip1J3QMK2 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.08□□□□□ -0.47
Bbip1J3QMK2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Bbip1J3QMK2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms