Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gm11618-201ENSMUST00000117946 267 ntBASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gm12203-201ENSMUST00000118235 598 ntBASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gm11425-201ENSMUST00000119608 498 ntBASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gm12209-201ENSMUST00000120089 596 ntBASIC13.3□□□□□ -0.28
Gm3139J3QK78 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gm44069-201ENSMUST00000204898 506 ntBASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gm9396-201ENSMUST00000076703 567 ntBASIC13.3□□□□□ -0.28
Gm3139J3QK78 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gm3139J3QK78 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Mir874-201ENSMUST00000104769 76 ntBASIC13.29□□□□□ -0.28
Gm3139J3QK78 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Mir1982-201ENSMUST00000157368 74 ntBASIC13.29□□□□□ -0.28
Gm3139J3QK78 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Gm27331-201ENSMUST00000183705 60 ntBASIC13.29□□□□□ -0.28
Gm3139J3QK78 Gm37922-201ENSMUST00000195596 455 ntBASIC13.29□□□□□ -0.28
Gm3139J3QK78 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.29□□□□□ -0.28
Gm3139J3QK78 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gm3139J3QK78 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.29□□□□□ -0.28
Gm3139J3QK78 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Gm43818-201ENSMUST00000200605 466 ntBASIC13.28□□□□□ -0.28
Gm3139J3QK78 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.28□□□□□ -0.28
Gm3139J3QK78 Gm45841-201ENSMUST00000207700 164 ntBASIC13.28□□□□□ -0.28
Gm3139J3QK78 Gm29705-201ENSMUST00000212598 474 ntBASIC13.28□□□□□ -0.28
Gm3139J3QK78 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.28□□□□□ -0.28
Gm3139J3QK78 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.28□□□□□ -0.28
Gm3139J3QK78 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm3139J3QK78 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm3139J3QK78 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms