Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm18584-201ENSMUST00000203098 964 ntBASIC16.04■□□□□ 0.16
NpcdF8VQB8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Gm30285-201ENSMUST00000214614 422 ntBASIC16.04■□□□□ 0.16
NpcdF8VQB8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NpcdF8VQB8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Gm14350-201ENSMUST00000116642 640 ntBASIC16.03■□□□□ 0.16
NpcdF8VQB8 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.03■□□□□ 0.16
NpcdF8VQB8 Mir6927-201ENSMUST00000184494 71 ntBASIC16.03■□□□□ 0.16
NpcdF8VQB8 Gm31256-201ENSMUST00000194705 506 ntBASIC16.03■□□□□ 0.16
NpcdF8VQB8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NpcdF8VQB8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.02■□□□□ 0.16
NpcdF8VQB8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Gm37042-201ENSMUST00000193816 581 ntBASIC16.02■□□□□ 0.16
NpcdF8VQB8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.02■□□□□ 0.16
NpcdF8VQB8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NpcdF8VQB8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
NpcdF8VQB8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NpcdF8VQB8 Gm12616-201ENSMUST00000118594 382 ntBASIC16.01■□□□□ 0.15
NpcdF8VQB8 Gm15276-201ENSMUST00000145953 498 ntBASIC16.01■□□□□ 0.15
NpcdF8VQB8 Gm12624-201ENSMUST00000177615 382 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms