Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Syngap1F6SEU4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Syngap1F6SEU4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Mir698-201ENSMUST00000102164 109 ntBASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Gm42550-201ENSMUST00000201553 960 ntBASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Gm45186-201ENSMUST00000206874 478 ntBASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Syngap1F6SEU4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Gm6152-201ENSMUST00000151704 340 ntBASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Gm21769-201ENSMUST00000211922 111 ntBASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Syngap1F6SEU4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Gm8566-201ENSMUST00000120174 465 ntBASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Gm8810-201ENSMUST00000172895 754 ntBASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Gm43378-201ENSMUST00000199336 582 ntBASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Syngap1F6SEU4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Syngap1F6SEU4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms