Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Gm9625-201ENSMUST00000180422 955 ntBASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Gm6304-201ENSMUST00000096579 447 ntBASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a3E9PWQ3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Gm37458-201ENSMUST00000194055 410 ntBASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Gm38007-201ENSMUST00000192187 313 ntBASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col6a3E9PWQ3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a3E9PWQ3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Gm4726-201ENSMUST00000135604 736 ntBASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Gm6019-201ENSMUST00000148369 736 ntBASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Gm11578-201ENSMUST00000118530 459 ntBASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a3E9PWQ3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm26013-201ENSMUST00000104404 119 ntBASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a3E9PWQ3 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms