Protein–RNA interactions for Protein: B1AS29

Grik3, Glutamate receptor ionotropic, kainate 3, mousemouse

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Grik3B1AS29 Gm12384-201ENSMUST00000119228 919 ntBASIC14.36□□□□□ -0.11
Grik3B1AS29 Gm12209-201ENSMUST00000120089 596 ntBASIC14.36□□□□□ -0.11
Grik3B1AS29 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.36□□□□□ -0.11
Grik3B1AS29 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.36□□□□□ -0.11
Grik3B1AS29 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.36□□□□□ -0.11
Grik3B1AS29 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.36□□□□□ -0.11
Grik3B1AS29 Gm29705-201ENSMUST00000212598 474 ntBASIC14.36□□□□□ -0.11
Grik3B1AS29 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.36□□□□□ -0.11
Grik3B1AS29 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Grik3B1AS29 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Grik3B1AS29 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.36□□□□□ -0.11
Grik3B1AS29 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Grik3B1AS29 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Grik3B1AS29 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.36□□□□□ -0.11
Grik3B1AS29 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.36□□□□□ -0.11
Grik3B1AS29 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Gm16177-201ENSMUST00000120728 718 ntBASIC14.35□□□□□ -0.11
Grik3B1AS29 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Grik3B1AS29 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.35□□□□□ -0.11
Grik3B1AS29 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.35□□□□□ -0.11
Grik3B1AS29 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.35□□□□□ -0.11
Grik3B1AS29 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.35□□□□□ -0.11
Grik3B1AS29 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Grik3B1AS29 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Gm13392-201ENSMUST00000117708 150 ntBASIC14.34□□□□□ -0.11
Grik3B1AS29 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Gm17420-201ENSMUST00000164753 153 ntBASIC14.34□□□□□ -0.11
Grik3B1AS29 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.34□□□□□ -0.11
Grik3B1AS29 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Grik3B1AS29 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Grik3B1AS29 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms