Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 AA619741-201ENSMUST00000195095 646 ntBASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Gm45453-201ENSMUST00000211758 853 ntBASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Mir125a-201ENSMUST00000083545 68 ntBASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 BC001981-202ENSMUST00000191393 1545 ntBASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm11127A7VMS2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Gm24158-201ENSMUST00000175263 71 ntBASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Gm18766-201ENSMUST00000189811 808 ntBASIC11.83□□□□□ -0.52
Gm11127A7VMS2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Gm11127A7VMS2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Gm25287-201ENSMUST00000103846 110 ntBASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Gm22918-201ENSMUST00000103855 110 ntBASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms