Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.71□□□□□ -0.7
Chd6A3KFM7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.7□□□□□ -0.7
Chd6A3KFM7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Gm17812-201ENSMUST00000204935 318 ntBASIC10.7□□□□□ -0.7
Chd6A3KFM7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.7□□□□□ -0.7
Chd6A3KFM7 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.7□□□□□ -0.7
Chd6A3KFM7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.7□□□□□ -0.7
Chd6A3KFM7 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.7□□□□□ -0.7
Chd6A3KFM7 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chd6A3KFM7 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.7□□□□□ -0.7
Chd6A3KFM7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.69□□□□□ -0.7
Chd6A3KFM7 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.69□□□□□ -0.7
Chd6A3KFM7 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Gm23255-201ENSMUST00000102244 110 ntBASIC10.69□□□□□ -0.7
Chd6A3KFM7 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Gm32025-201ENSMUST00000217960 307 ntBASIC10.69□□□□□ -0.7
Chd6A3KFM7 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.69□□□□□ -0.7
Chd6A3KFM7 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Gm21811-201ENSMUST00000096485 930 ntBASIC10.69□□□□□ -0.7
Chd6A3KFM7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.69□□□□□ -0.7
Chd6A3KFM7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.69□□□□□ -0.7
Chd6A3KFM7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chd6A3KFM7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Chd6A3KFM7 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Chd6A3KFM7 Gm25998-201ENSMUST00000175397 53 ntBASIC10.68□□□□□ -0.7
Chd6A3KFM7 Gm44329-201ENSMUST00000197469 112 ntBASIC10.68□□□□□ -0.7
Chd6A3KFM7 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.68□□□□□ -0.7
Chd6A3KFM7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Chd6A3KFM7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Chd6A3KFM7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd6A3KFM7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd6A3KFM7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd6A3KFM7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Chd6A3KFM7 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms