Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm12490-201ENSMUST00000120255 560 ntBASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gm11918-201ENSMUST00000121660 179 ntBASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gm9794-201ENSMUST00000202370 423 ntBASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atg4a-psA0A0G2JFS9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm11978-201ENSMUST00000122315 466 ntBASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm7287-201ENSMUST00000205267 602 ntBASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Gm13612-201ENSMUST00000119276 390 ntBASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atg4a-psA0A0G2JFS9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms