Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav8-1A0A075B641 Gm5366-201ENSMUST00000215494 1338 ntBASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Gm7230-201ENSMUST00000173026 815 ntBASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Gm6550-201ENSMUST00000187574 993 ntBASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.56□□□□□ -0.88
Trav8-1A0A075B641 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trav8-1A0A075B641 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms