Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Rps4l-201ENSMUST00000071745 943 ntBASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Mir497b-201ENSMUST00000093601 125 ntBASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trav7n-4A0A075B620 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm13823-201ENSMUST00000119930 345 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm29310-201ENSMUST00000185468 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21825-201ENSMUST00000185728 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm29109-201ENSMUST00000185895 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21896-201ENSMUST00000186520 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21873-201ENSMUST00000186728 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21794-201ENSMUST00000187056 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21880-201ENSMUST00000187275 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21826-201ENSMUST00000187451 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21198-201ENSMUST00000188393 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21749-201ENSMUST00000189343 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21901-201ENSMUST00000189568 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm29424-201ENSMUST00000189716 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm28599-201ENSMUST00000189838 694 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21867-201ENSMUST00000189917 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm29269-201ENSMUST00000190087 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21722-201ENSMUST00000190153 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm28423-201ENSMUST00000190701 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21899-201ENSMUST00000190745 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21910-201ENSMUST00000191163 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21849-201ENSMUST00000191571 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm28678-201ENSMUST00000191593 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm20910-201ENSMUST00000193268 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm21871-201ENSMUST00000194621 696 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav7n-4A0A075B620 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms