Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
PdfS4R2K0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
PdfS4R2K0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PdfS4R2K0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
PdfS4R2K0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.27□□□□□ -0.77
PdfS4R2K0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.27□□□□□ -0.77
PdfS4R2K0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.27□□□□□ -0.77
PdfS4R2K0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.27□□□□□ -0.77
PdfS4R2K0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.27□□□□□ -0.77
PdfS4R2K0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.27□□□□□ -0.77
PdfS4R2K0 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.27□□□□□ -0.77
PdfS4R2K0 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.27□□□□□ -0.77
PdfS4R2K0 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.27□□□□□ -0.77
PdfS4R2K0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
PdfS4R2K0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
PdfS4R2K0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PdfS4R2K0 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.26□□□□□ -0.77
PdfS4R2K0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Gm5479-201ENSMUST00000160578 435 ntBASIC10.26□□□□□ -0.77
PdfS4R2K0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PdfS4R2K0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
PdfS4R2K0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms