Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb3S4R1G7 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Gm27680-201ENSMUST00000184192 160 ntBASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Gm17837-201ENSMUST00000186435 985 ntBASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Gm43575-201ENSMUST00000196420 516 ntBASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Gm6888-201ENSMUST00000221983 706 ntBASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb3S4R1G7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.06□□□□□ -0.48
H2afb3S4R1G7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Gm23935-201ENSMUST00000102303 57 ntBASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Gm24270-201ENSMUST00000102326 57 ntBASIC12.05□□□□□ -0.48
H2afb3S4R1G7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Gm24245-201ENSMUST00000157318 57 ntBASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H2afb3S4R1G7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H2afb3S4R1G7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms