Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Mir6977-201ENSMUST00000184960 64 ntBASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cldn6Q9Z262 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gm27437-201ENSMUST00000183429 107 ntBASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gm28631-201ENSMUST00000190740 334 ntBASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.53□□□□□ -0.4
Cldn6Q9Z262 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gm2423-201ENSMUST00000074863 733 ntBASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn6Q9Z262 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn6Q9Z262 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn6Q9Z262 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn6Q9Z262 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cldn6Q9Z262 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn6Q9Z262 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn6Q9Z262 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Cldn6Q9Z262 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn6Q9Z262 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.52□□□□□ -0.41
Cldn6Q9Z262 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Gm42550-201ENSMUST00000201553 960 ntBASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn6Q9Z262 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms