Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Prpf40aQ9R1C7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.73□□□□□ -0.05
Prpf40aQ9R1C7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Gm11524-201ENSMUST00000119349 807 ntBASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Gm43094-201ENSMUST00000196549 921 ntBASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Gm19078-201ENSMUST00000206311 727 ntBASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.72□□□□□ -0.05
Prpf40aQ9R1C7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Gm12485-201ENSMUST00000119641 291 ntBASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Gm37917-201ENSMUST00000194711 392 ntBASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Prpf40aQ9R1C7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms