Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.59■□□□□ 0.09
Scn11aQ9R053 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.59■□□□□ 0.09
Scn11aQ9R053 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.59■□□□□ 0.09
Scn11aQ9R053 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.59■□□□□ 0.09
Scn11aQ9R053 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.59■□□□□ 0.09
Scn11aQ9R053 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scn11aQ9R053 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.58■□□□□ 0.09
Scn11aQ9R053 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn11aQ9R053 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Scn11aQ9R053 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Scn11aQ9R053 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scn11aQ9R053 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Gm23270-201ENSMUST00000104055 131 ntBASIC15.58■□□□□ 0.08
Scn11aQ9R053 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.58■□□□□ 0.08
Scn11aQ9R053 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.58■□□□□ 0.08
Scn11aQ9R053 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.58■□□□□ 0.08
Scn11aQ9R053 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.58■□□□□ 0.08
Scn11aQ9R053 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm13736-201ENSMUST00000119272 253 ntBASIC15.57■□□□□ 0.08
Scn11aQ9R053 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm6407-201ENSMUST00000176468 549 ntBASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm39404-201ENSMUST00000216350 313 ntBASIC15.57■□□□□ 0.08
Scn11aQ9R053 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.57■□□□□ 0.08
Scn11aQ9R053 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm11331-201ENSMUST00000119764 288 ntBASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Gm19208-201ENSMUST00000213861 912 ntBASIC15.57■□□□□ 0.08
Scn11aQ9R053 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scn11aQ9R053 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Scn11aQ9R053 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms