Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clcf1Q9QZM3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Grk6-205ENSMUST00000224653 2976 ntBASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clcf1Q9QZM3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clcf1Q9QZM3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Clcf1Q9QZM3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Clcf1Q9QZM3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Gm2495-201ENSMUST00000191160 466 ntBASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Gm43433-201ENSMUST00000196573 481 ntBASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Clcf1Q9QZM3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clcf1Q9QZM3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms