Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a2Q9JLR1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a2Q9JLR1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.08□□□□□ -0.48
Sec61a2Q9JLR1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a2Q9JLR1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a2Q9JLR1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.08□□□□□ -0.48
Sec61a2Q9JLR1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a2Q9JLR1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61a2Q9JLR1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Sec61a2Q9JLR1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Gm6912-201ENSMUST00000117218 544 ntBASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61a2Q9JLR1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Gm7063-201ENSMUST00000186840 981 ntBASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.06□□□□□ -0.48
Sec61a2Q9JLR1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms