Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Mir874-201ENSMUST00000104769 76 ntBASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Gm10013-201ENSMUST00000106074 672 ntBASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco4Q9JIS3 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.67□□□□□ -0.7
Smco4Q9JIS3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Gm7506-201ENSMUST00000207758 815 ntBASIC10.67□□□□□ -0.7
Smco4Q9JIS3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco4Q9JIS3 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco4Q9JIS3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms